I can only speak for myself, but I have no problem with MT per se. I actually like the idea of supporting the developer of a game I like and getting something nonconsequential like pink paint in return.
In EVE the situation is a bit different though: A subscription is already one of the most expensive MMO subscriptions, their idea of support seems to be $20-$70 which I find ridiculous, they had previously actually announced plans to have these items made by players, when you call them on it they start rambling about $1000 designer pants, they publicly stated that their implementation of the store is so incomplete that they may have to sell spawned coloured ships until it can do trade-ins, they refuse to answer the non-vanity mt question with a simple yes or no and if they did then there's still that they had actually implemented them before in the form of paid attribute remaps, and the worst part of it is last summer they announced that EVE itself wasn't going to get any major fixes or new content while they work on Dust and WoD and code EVE has in common with them, so we know those monocles actually support their purely mt based and confirmed pay2win games Dust and WoD instead of EVE. Oh yeah and that's only the technical part. There's also those various leaked documents that show clear contempt for the player base, to which they don't even want to talk btw., they preferred to announce a one week comms silence and a meeting with a handful of players who are essentially drinking buddies of the developers on account of regular free trips to Iceland. And as if that wasn't enough it turns out they can still give interviews to newspapers, they just don't want to talk to their players.
In other words they pulled pretty much every single crap move they could come up with and now there's something for everybody to rage about. Had they implemented ship paint to work like EVE's equivalent of the plan in this dev blog, i.e. paint from the LP store and then an mt payment to apply it, I would have a hangar of pink ships now and I think it's a fair guess that most of the rage would not have happened.